PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517010.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 307aa    MW: 34522.8 Da    PI: 4.8591
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517010.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.6e-18110157152
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkk 52 
                     s+y+GVr++  +g+W+AeIrd + +   r r++lg+++taeeA +a++  r++
  XP_023517010.1 110 SKYRGVRQRA-WGKWAAEIRDpF-K---RSRIWLGTYDTAEEASQAYESRRLQ 157
                     89*****998.**********55.3...5******************876665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MPHSNQKLVS SNRKSKLHPK NFSADSKMRR KVRIICYDPD ATDSSSSEDE GERYGRKFNR  60
TVHEIHLPPL KKTLESESSQ NSNNENKNPK LKQSKVQIKN PSSSRRQSSS KYRGVRQRAW  120
GKWAAEIRDP FKRSRIWLGT YDTAEEASQA YESRRLQFEA MAAEMAVEEG NRTVSSSAAV  180
LSESTAETTV SHTSPSSVFE WDDSTSQSQD LKVGDSIKEE TGTNMNYLQE ADQSHPFIDE  240
INMGINFDSI LADGIGMFLE DFVSLENTQI FGFGDDEPSG FPNADFGDFG NDDISCWLDD  300
SINITCP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.13e-33ERF family protein