PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517058.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 205aa    MW: 23077.3 Da    PI: 7.0976
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.89.1e-09113154854
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     + r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_023517058.1 113 AARLRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 154
                     6799*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MDPHHLPNPS SHLQFSAIDD PGIVHLHHVH ELNSIWPSLL LPHQPLPTSS THLMSGYVNW  60
AGNDQEEPEE ELGAMKEMMY KIAAMQPVDI DPSTIRKPKR RNVRISDDPQ SIAARLRRER  120
ISEKIRILQR LVPGGTKMDT ASMLDEAIRY VKFLKRQIQF LQSTQPSTGD DAVVGGWPFP  180
FHKANTSNSS STSMEATPTI MPSGW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1115120RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.14e-47bHLH family protein