PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517060.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 196aa    MW: 22063.2 Da    PI: 8.062
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517060.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.98.5e-09104145854
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     + r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_023517060.1 104 AARLRRERISEKIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 145
                     6799*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MDPHHLPNPS SHLQFSAIDD PGIVHLHHVH ELNSIWPSLL LPHQPLPTSS THLMSGYEPE  60
EELGAMKEMM YKIAAMQPVD IDPSTIRKPK RRNVRISDDP QSIAARLRRE RISEKIRILQ  120
RLVPGGTKMD TASMLDEAIR YVKFLKRQIQ FLQSTQPSTG DDAVVGGWPF PFHKANTSNS  180
SSTSMEATPT IMPSGW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1106111RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00120.14e-48bHLH family protein