PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517160.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 283aa    MW: 31420.8 Da    PI: 5.5086
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517160.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.4e-20123173255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrd      k +r++lg+f taeeAa a+++a+++++g
  XP_023517160.1 123 HYRGVRRRP-WGKYAAEIRDS---SrKGARVWLGTFNTAEEAALAYDKAALRIRG 173
                     8********.**********3...2234*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MAIIQQDKSE AILENVWANF IGENGLDGHG GGTRSGGSGL NKSWTELPSL CCGDGSMEVL  60
ERLPSLGRWI SMGADAWEEL LHGIVPASNT HQSFHDNLES SPVHHSGFVV DSTRVETAVA  120
TKHYRGVRRR PWGKYAAEIR DSSRKGARVW LGTFNTAEEA ALAYDKAALR IRGPKAHLNF  180
PVDTVVEAMG MHSSTNIDHL DNLMPSFQGH DDSASYSQLG SHGSSSIIGK RTTREWEDNL  240
NFNDMEFEHP TVKRKTNMFY NDFDVFEFQD LGSDYLDNLM SSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.19e-33ERF family protein