PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517176.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 152aa    MW: 16831.7 Da    PI: 6.942
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517176.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2521.8e-161363155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    ++ykGVr++k +g+Wv+eIr+p   g +  r +lg++ ++e Aa a++ a  +l+ 
  XP_023517176.1 13 KKYKGVRRRK-WGKWVSEIRVP---G-TqERMWLGSYSSPEAAAVAHDVAYYCLRR 63
                    59*****998.**********8...3.35************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
MASNSNTSPP ETKKYKGVRR RKWGKWVSEI RVPGTQERMW LGSYSSPEAA AVAHDVAYYC  60
LRRPSNLDHL NFPPMVLPLT NHLLIRDDMS PGSIQKAASD AAMAVDAQYI CNSSPDRGSS  120
GGTGAFHGSG YESYTAMNDQ DRDRDISIED YL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11622KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.11e-36ERF family protein