PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517178.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 252aa    MW: 28547.5 Da    PI: 6.7024
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517178.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.46.3e-1478130155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     ++ +hn+ Er RR++iNs ++ Lr+llP+     + kKls  ++  +   YI +Lq
  XP_023517178.1  78 KKLSHNASERDRRKKINSLYSSLRSLLPStY---HMKKLSNPATISRILSYIPELQ 130
                     6789*************************66...8888***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MLVASSPLFS PHQWPLDDPI SFHHQHNYHF SLFEPSDHSF HVQFSPPPLQ LPHVELDNYP  60
STATPLLDGS TKVSNVAKKL SHNASERDRR KKINSLYSSL RSLLPSTYHM KKLSNPATIS  120
RILSYIPELQ QQVEGLMRKK EELMTAMVGQ EVDSDEEKRK KCAATSSSSI ISASRLGRRE  180
MAVQICTDID GGHRNSLSDL LVCLEEDGLL LWNASSFESF DGKVFHNLHL QMESSCRMEP  240
EMVSIKILEM FP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.17e-23bHLH family protein