PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023517303.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Protein Properties

Length: 411aa MW: 47221.2 Da PI: 9.9834

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023517303.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	49.6	7e-16	14	99	8	98
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +++l+ + l++pkkf+++hg+ s+ ++l+ ++g +W+v l + +++ ++l++GW +F++ L+ g +vFk dg s+f ++f+ XP_023517303.1 14 HNNLEDRKLMIPKKFVKDHGE--LLSTSVRLKLPDGMEWKVGL--TTAPNGvVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTF--QTSIFD 99 55677778*********84..58999***********..77777779**********************5554555..777776 PP
2	B3	61.7	1.2e-19	200	286	1	88
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrs 88 f+ v+++++v + +++pk+fae+h ++l++++gr+W + ++ r++++ +++++GWk+Fv++n LkegD+ +F+l++++ XP_023517303.1 200 FKIVMKQPNVRGKFAMTIPKDFAEKHlpddF------GIIKLQTPNGRKWPLLYKRRRNQENfVYFSSGWKRFVEENVLKEGDIGLFQLIKKD 286 67789999999*************64321......26***********775444446***********************99754 PP
3	B3	42	1.7e-13	320	403	11	99
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +k+ l +p fa+eh ++ +s +l++ + r+W v l r++++++ l++GW F +ngL++gD+++F+++++++ ++v++f++ XP_023517303.1 320 HKKFVLNIPMVFAKEHFSSDMRSAKLQVGN---RQWIVAL--RQYGSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKH 403 5667799*******77767777777555...***..*****************************9987666678888875 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MAPSSPQFFR IVLHNNLEDR KLMIPKKFVK DHGELLSTSV RLKLPDGMEW KVGLTTAPNG 60 VVWLQNGWHK FAEHYSLEFG SLLVFKSDGF STFQTSIFDP SGVETEYCCI FNDSRAEFTM 120 EYEDSDENTE SSPLRLSKRK NKPSVPSPPQ SRKKMKPEEG CLIIKNMPKT EAGVSSRRQQ 180 FVNKPEAAQR FTSKSEKPIF KIVMKQPNVR GKFAMTIPKD FAEKHLPDDF GIIKLQTPNG 240 RKWPLLYKRR RNQENFVYFS SGWKRFVEEN VLKEGDIGLF QLIKKDIFSF TKLQDTSPFP 300 SPATNTRNPC FEANILNRRH KKFVLNIPMV FAKEHFSSDM RSAKLQVGNR QWIVALRQYG 360 SSVRLSAGWC LFYGDNGLED GDSCLFEMVD TKNCVFKVTI FKHVSSSASM D

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MAPSSPQFFR IVLHNNLEDR KLMIPKKFVK DHGELLSTSV RLKLPDGMEW KVGLTTAPNG  60
VVWLQNGWHK FAEHYSLEFG SLLVFKSDGF STFQTSIFDP SGVETEYCCI FNDSRAEFTM  120
EYEDSDENTE SSPLRLSKRK NKPSVPSPPQ SRKKMKPEEG CLIIKNMPKT EAGVSSRRQQ  180
FVNKPEAAQR FTSKSEKPIF KIVMKQPNVR GKFAMTIPKD FAEKHLPDDF GIIKLQTPNG  240
RKWPLLYKRR RNQENFVYFS SGWKRFVEEN VLKEGDIGLF QLIKKDIFSF TKLQDTSPFP  300
SPATNTRNPC FEANILNRRH KKFVLNIPMV FAKEHFSSDM RSAKLQVGNR QWIVALRQYG  360
SSVRLSAGWC LFYGDNGLED GDSCLFEMVD TKNCVFKVTI FKHVSSSASM D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	5e-33	B3 family protein