PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517307.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family B3
Protein Properties Length: 295aa    MW: 33243.6 Da    PI: 10.4399
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517307.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.99.1e-1913103199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffkv++ +d+++++ +++p  f ++  g+   +++ t++d +g+sW v+l  +k ++ +++++GW+ Fv+ + Lk gDf+vF++dg  +f++ vk
  XP_023517307.1  13 FFKVFL-PDSGSLH-MSIPPAFQKHLHGI--FPIKATIRDHTGKSWCVTL--EKVDELVYFKNGWQAFVDYHCLKYGDFLVFRYDG--GFTFDVK 99 
                     788884.5777777.9******9666878..7899***************..***999*************************987..8888*** PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f k
  XP_023517307.1 100 IFGK 103
                     9987 PP
2B337.83.5e-122062901599
                     -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE..E-SS.SEE..EEEEE-S CS
              B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk..ldgr.sefelvvkvfrk 99 
                      ++l+ + +++ + +k ++   +l+de+g+ W  k+  + +++r v  +GW+ F k ngL+++D + F+  l++   +++l+vkv r+
  XP_023517307.1 206 KVYLSGRVVRDQN-IKLKP-NTVLRDEEGKLWPAKV-CSISQNRLVVNAGWSAFYKGNGLRVNDKCEFEfvLEKGnLCRQLNVKVTRR 290
                     4666666665553.33344.6789************.4788888*************************5544334777788887765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MNPSIETASS LEFFKVFLPD SGSLHMSIPP AFQKHLHGIF PIKATIRDHT GKSWCVTLEK  60
VDELVYFKNG WQAFVDYHCL KYGDFLVFRY DGGFTFDVKI FGKNGCKKAV VAEADNSVPI  120
LDSVLAVAGM SPPILKVKVE AVDEKEEVKP LISGKRKLLQ VGSGIVHKPR RVPTRGRPGN  180
ASNTVAYVAP KGPSFERTMK HWSHKKVYLS GRVVRDQNIK LKPNTVLRDE EGKLWPAKVC  240
SISQNRLVVN AGWSAFYKGN GLRVNDKCEF EFVLEKGNLC RQLNVKVTRR RRSLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.11e-38B3 family protein