PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517458.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 207aa    MW: 22870.1 Da    PI: 10.213
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517458.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.88.2e-32136194259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      D y+WrKYGqK +kgs++pr+YY+C+s  gCp++k+ver+ +dp ++++tYegeHnh+
  XP_023517458.1 136 ADDYSWRKYGQKAIKGSPHPRGYYKCSSMrGCPARKHVERAVDDPAILVVTYEGEHNHT 194
                     69************************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MAMELVPQLS PLSDSTTNNM EANAVQESAS AYDSVDQLIR VFSNAYQPSP SIQSPNSNHS  60
NSTLDFPTDA VSKCKKIISL MGRSRVGHAR FRRAPLPAVD LVSSSGRCHC SKKRKLRVKR  120
VVRMAAISLK TADIPADDYS WRKYGQKAIK GSPHPRGYYK CSSMRGCPAR KHVERAVDDP  180
AILVVTYEGE HNHTLTVPKT SNISKEI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.17e-46WRKY family protein