PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023517464.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 237aa MW: 26004.7 Da PI: 8.9869

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023517464.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	118.8	2e-37	23	81	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 + +kcprCds ntkfCyynnyslsqPry+Ck+CrryWt+GG+lrnvPvGgg+rk k+ XP_023517464.1 23 PQPQKCPRCDSLNTKFCYYNNYSLSQPRYLCKTCRRYWTQGGTLRNVPVGGGCRKGKRP 81 6789***************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MQRGRDDQDR RLKALQAQNQ AQPQPQKCPR CDSLNTKFCY YNNYSLSQPR YLCKTCRRYW 60 TQGGTLRNVP VGGGCRKGKR PKQSSHSSNN SNSQPLPQIV QSSLTTTPPP VIFSGTPVIT 120 PSSFFNPVGE LGSSSSWVNS FGSSQGQRPI QPPEIIYDMM DQSSGKAAVS SSSQAGWSES 180 YINNYISNPI AAAGENIIWT PNNNNNDTAT TIAGNPTNDS TTINQWPDYM TGFDPPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60850.1	1e-33	Dof family protein