PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517468.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ZF-HD
Protein Properties Length: 248aa    MW: 26693.7 Da    PI: 7.6293
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517468.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer99.62.3e-3148102358
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                     k +Y+eClkNhA+ +Ggha+DGCgEf+++ g+egt +alkCaAC+CHRnFHR+e++
  XP_023517468.1  48 KPKYRECLKNHAVGIGGHALDGCGEFLAA-GAEGTLDALKCAACNCHRNFHRKETD 102
                     679*************************9.999********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MDFEDQDDHD DDMDMAAAAA AASYDPLQGN SGGRVKTPTS TDPSGQRKPK YRECLKNHAV  60
GIGGHALDGC GEFLAAGAEG TLDALKCAAC NCHRNFHRKE TDNLNATAVG VGLGIAEPFL  120
LPHPSQFSPY YRTPTGYLHV APHHRPLALP STSGGGGGGG TLSREEQEDM SNPSGGGGGS  180
SSLGRKRFRT KFTQEQKDRM LGLAETLGWR IQKHDEALVQ QFCNETGVKR HVLKVWMHNN  240
KNTLGKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.17e-68ZF-HD family protein