PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023517496.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 360aa MW: 41978.8 Da PI: 4.9661

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023517496.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178.8	1.4e-55	10	139	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv +yL+kkv+++k++l +vik++d+y++ePwdL++ ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v XP_023517496.1 10 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIKDIDLYRIEPWDLQEkcwIGYEEQNEWYFFSHKDKKYPTGTRTNRATLAGFWKATGRDKAV 103 69**************************.9***********953543344677******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ k++l+g++ktLvfy+grap+g+ktdW+mheyrle XP_023517496.1 104 YD-KNKLIGMRKTLVFYRGRAPNGQKTDWIMHEYRLE 139 .999*****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MMESMESSCV PPGFRFHPTD EELVGYYLRK KVASQKIDLD VIKDIDLYRI EPWDLQEKCW 60 IGYEEQNEWY FFSHKDKKYP TGTRTNRATL AGFWKATGRD KAVYDKNKLI GMRKTLVFYR 120 GRAPNGQKTD WIMHEYRLES DENGPPQEEG WVVCRAFKKR ANGQSKTAVE RWDSSYFYDE 180 PSRVCSGIDP LEFMSRQSMP QGLLEHNNMM CKQEMEGENV KLIAYNDPFV QLPQLESPSL 240 PLMKRSSSIS LVSECNEEEE PPTKRRYDNN NNNNRSSKVT DWRALDKFVA SQLSQEDAFE 300 GEGDSRFGAQ NNNYNNNNNH NSADMAILLM ENRVHDEENL YKEFLSSNPE SDFGICIFEK

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MMESMESSCV PPGFRFHPTD EELVGYYLRK KVASQKIDLD VIKDIDLYRI EPWDLQEKCW  60
IGYEEQNEWY FFSHKDKKYP TGTRTNRATL AGFWKATGRD KAVYDKNKLI GMRKTLVFYR  120
GRAPNGQKTD WIMHEYRLES DENGPPQEEG WVVCRAFKKR ANGQSKTAVE RWDSSYFYDE  180
PSRVCSGIDP LEFMSRQSMP QGLLEHNNMM CKQEMEGENV KLIAYNDPFV QLPQLESPSL  240
PLMKRSSSIS LVSECNEEEE PPTKRRYDNN NNNNRSSKVT DWRALDKFVA SQLSQEDAFE  300
GEGDSRFGAQ NNNYNNNNNH NSADMAILLM ENRVHDEENL YKEFLSSNPE SDFGICIFEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-131	NAC family protein