PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517808.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 247aa    MW: 27336.5 Da    PI: 4.4284
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517808.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.90.000432022331854
                     HHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH  18 safeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     +   +Lre+lP          ++ a++L +Av+Y+ksL
  XP_023517808.1 202 KMVKKLREILPGgY------QMTTAMVLDEAVKYLKSL 233
                     55578999999855......79**************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MDFMQSDLNC YLKEAMLPTA NQGDGDHMQI PLSSAFPSVL PPGRKNLGPF NAVEFQPSEI  60
CPQNFIIFDH TDDGSQIMFH PAICNKLGGP TANMSSKYIQ KNSCIDENYE DREIPSPLME  120
DADDIDALLS LEDKDHEDVD GSEDDEISSA RSHLNYGNRS PDSSSSSYSS KPRKNRSVNP  180
VRTESSSGSS CDGDMKQLKL KKMVKKLREI LPGGYQMTTA MVLDEAVKYL KSLKDEVQEL  240
GLGSLEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.12e-30bHLH family protein