PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517820.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 251aa    MW: 27898.1 Da    PI: 10.2069
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517820.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH421.7e-1372118354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+++E+rRRdriN  +++Lr+l+Pk+      K++Ka+ L  A++ +k+L
  XP_023517820.1  72 KSHSQAEKRRRDRINAQLATLRKLIPKS-----DKMDKAALLGSAIDQVKDL 118
                     79*************************8.....7*************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MEKNWDFSST KPEGINWAHC NGNSSREPSL LLPFMINPQL SSSTEVQFDG FPSFSTSTEG  60
MVADVRAVSA SKSHSQAEKR RRDRINAQLA TLRKLIPKSD KMDKAALLGS AIDQVKDLKR  120
KAMEVSKNMT VPTDMDELTI DSTMVEDNNK NNIAIKVSVS CDDRPELFAE LIQVIKGLRL  180
TTIRADMASV GGRIKSILVL CNKDGEKNVC LKTVQQSLKL VLSRISSSSA ASTCRIRSKR  240
QRFFLPSHYS K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.12e-46bHLH family protein