PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023517898.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

C2H2

Protein Properties

Length: 161aa MW: 17468.3 Da PI: 10.4918

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023517898.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.3	1.3e-05	80	102	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ Cg++Fs+ L H+r+H XP_023517898.1 80 HECGLCGQVFSTGQALGGHMRRH 102 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence
MAAKRIRQEF EASDIAKSLM LLSQTSNSKI PGQNAAVFQC KTCNRLFSSF QALGGHRASH 60 KRPRTAADEP KDAAESKKMH ECGLCGQVFS TGQALGGHMR RHRMTTTNGG GFSVVPAVEK 120 IPVLNRSGSM GVKCLDLNLT PLENDLKLLF GKMAPRVDLV L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	6e-49	C2H2 family protein