PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023518049.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 241aa    MW: 27106.8 Da    PI: 10.5409
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023518049.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.61.9e-1271122154
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksL 54 
                     ++ +hn+ Er RR+++Ns +  Lr llP+    + +K +s  ++  +A +YI +L
  XP_023518049.1  71 KKLKHNASERDRRKKMNSLYTSLRCLLPST---NRTKtMSNPATISRALKYIPEL 122
                     5789*************************8...78888**************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MIPSSSTTHG GWIPGNPQST NGRSSELFIQ FSSPQPSHHV KVESCSPPSA GDGHHRGGGG  60
CGGDDPLAVA KKLKHNASER DRRKKMNSLY TSLRCLLPST NRTKTMSNPA TISRALKYIP  120
ELRQHVEELR RRKQGLETKI NAMTHDQQKQ VRKNKEAPWM GCSSCAVNWL RENEALLQLT  180
SNDTFKLKFS QILRSLDEDE LLVKTVSTFQ SFDGRHFFTL LVQAKPNTPS RVLQEILNRK  240
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.13e-30bHLH family protein