PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023518081.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 195aa    MW: 21533 Da    PI: 7.5415
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023518081.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.31.5e-095898954
                    HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                     r RR+ri ++f  L++l+P       +K++ +++L +A++Y+k L
  XP_023518081.1 58 ARERRHRISDRFKILQSLVPGG-----TKMDTVSMLDEAIHYVKFL 98
                    699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MDYTFPASNP SSCGSSSGGA TTGATRREKL KKNNSGSCGG KRSKGVVKLS TDPQSVAARE  60
RRHRISDRFK ILQSLVPGGT KMDTVSMLDE AIHYVKFLKT QIWLHQTMIN FVDYDDSSNS  120
TVATAAAVNC GFHLDQIAGG EFHNNHTNSF VYSQNDVVKM EEPPNLLPQL DPNPLYFPSG  180
QDQYMCSSYD AYMNF