PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023518085.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 433aa MW: 47967.1 Da PI: 4.4395

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023518085.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	148.7	3e-46	7	133	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppGfrF+Pt elv++yLk+kv +kkl+ vi+e+diyk+ PwdLp k ++k+++ +wyfF++r++kya+g r nr tk g+Wk+tgkd++v + XP_023518085.1 7 PPGFRFQPTHVELVMFYLKRKVMQKKLPR-GVISELDIYKYAPWDLPdKsCMKSGDLKWYFFCPRERKYASGARMNRGTKFGFWKSTGKDRPVSC 100 8************************99.99**********96358888999********************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++e+vg ktL+f++g+apkg t+Wvmheyr+ XP_023518085.1 101 -NNEDVGQIKTLTFFRGKAPKGDPTNWVMHEYRI 133 .999**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MKRSSQPPGF RFQPTHVELV MFYLKRKVMQ KKLPRGVISE LDIYKYAPWD LPDKSCMKSG 60 DLKWYFFCPR ERKYASGARM NRGTKFGFWK STGKDRPVSC NNEDVGQIKT LTFFRGKAPK 120 GDPTNWVMHE YRIEEKKLSL QNVAQDAYVL CVIFQKDGPG PRNGAQYGAP FIEEDWDSDD 180 PEDVDNPSGL SVLPSTEPSN SFAPGTSTAP SNIFGCSSAS YITENLASTS KEIPQIACGS 240 VAPVEMPQNL DNMNDGITME ELFPDGNSNF NDANGFQATV AASNNADRID TIFEGLENID 300 GWSDAFNGNG NGYITDHQVI HSSTFPIDRA IVSSDPMSFL ELTDLDIPLS PNYQDPMSFL 360 ELNDLNATCN RDSVNEPGFP FSSFGAAYNP GYPDAHISGS SQFAGLQENV PPNSNEGCNG 420 FEASWPKFDW NSH

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MKRSSQPPGF RFQPTHVELV MFYLKRKVMQ KKLPRGVISE LDIYKYAPWD LPDKSCMKSG  60
DLKWYFFCPR ERKYASGARM NRGTKFGFWK STGKDRPVSC NNEDVGQIKT LTFFRGKAPK  120
GDPTNWVMHE YRIEEKKLSL QNVAQDAYVL CVIFQKDGPG PRNGAQYGAP FIEEDWDSDD  180
PEDVDNPSGL SVLPSTEPSN SFAPGTSTAP SNIFGCSSAS YITENLASTS KEIPQIACGS  240
VAPVEMPQNL DNMNDGITME ELFPDGNSNF NDANGFQATV AASNNADRID TIFEGLENID  300
GWSDAFNGNG NGYITDHQVI HSSTFPIDRA IVSSDPMSFL ELTDLDIPLS PNYQDPMSFL  360
ELNDLNATCN RDSVNEPGFP FSSFGAAYNP GYPDAHISGS SQFAGLQENV PPNSNEGCNG  420
FEASWPKFDW NSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09330.3	1e-80	NAC family protein