PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023518147.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WOX
Protein Properties Length: 296aa    MW: 33047.3 Da    PI: 7.7265
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023518147.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox634.4e-202788257
                    T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    ++R+t+t++q+++L+el+++   r psa+++++++++l    +++ ++V++WFqN++a+e++
  XP_023518147.1 27 STRWTPTTDQIRILKELYYNngVRSPSADQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 88
                    58****************98678*************************************97 PP
2Wus_type_Homeobox114.45.5e-372690265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ++tRWtPt++Qi+iL+ely+ +G+r+P++++iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+
     XP_023518147.1 26 SSTRWTPTTDQIRILKELYYnNGVRSPSADQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 90
                       789***************9779*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MDHQKAAAQG SEEGSNGKGG FVCRQSSTRW TPTTDQIRIL KELYYNNGVR SPSADQIQRI  60
SARLRQYGKI EGKNVFYWFQ NHKARERQKK RFTSSASDHL HHHQQQQQIP VPKQQQQQQQ  120
QLQSSLISSK PEDSSSSPLF HTKYPPTPSS SVMVAVGHMG NYGYGSTTFE NSFRECSISS  180
GGSSSMVGSR RSHHMGSWIG VDPYSSPASA AATVFEKTKY VEESMEDEEQ EIETLPLFPI  240
HDDRSLGGFC SMKPKYSDGY YTTTWYGRSD DGATGSRTSL ELSLNSYAAI SPDDAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.14e-42WOX family protein