PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023518238.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NF-YA
Protein Properties Length: 207aa    MW: 22944.8 Da    PI: 8.9495
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023518238.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.83.1e-32112168158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep++VNaKQy++Il+RRq+Rak+e+e+k   ksrkpylheSRh hAlrR+Rg+gGrF
  XP_023518238.1 112 EEPVFVNAKQYHGILRRRQSRAKAESENKA-LKSRKPYLHESRHLHALRRARGCGGRF 168
                     69***************************9.9*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MTSSVHDYSD NGEADKLQKY SESQNHSSSV INGLNQPGIT ASNQYLTPLQ VGAEHALAPP  60
AYPYPDPYFR SIFSPYDAQP YPPQPYGGQP MVHLQLMGIQ QAGVPLPTDA VEEPVFVNAK  120
QYHGILRRRQ SRAKAESENK ALKSRKPYLH ESRHLHALRR ARGCGGRFLK SNKNENQQNE  180
VASAHASNCK EIEVPIPASV VLVILHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.21e-52NF-YA family protein