PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023518247.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 306aa    MW: 35055.3 Da    PI: 4.8761
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023518247.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.33e-53121391129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppG+rFhPtd el+ +yL+kk+ +  +++  +i+e+d +k+ePw+Lp+++k +ekewyfF +rd+ky+tg r+nrat++gyWkatgkd+e+l+ 
  XP_023518247.1  12 LPPGYRFHPTDLELIAFYLTKKIINPAFSA-AAIAEADFNKSEPWELPQMAKMGEKEWYFFNQRDRKYPTGMRTNRATQTGYWKATGKDREILNG 105
                     79*************************999.78***************999999****************************************9 PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrle 129
                     ++ lvg+kktLvfykgrap+gekt+Wvmhe+rle
  XP_023518247.1 106 RTVLVGMKKTLVFYKGRAPHGEKTNWVMHEFRLE 139
                     9999***************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MEEPPPTPAV DLPPGYRFHP TDLELIAFYL TKKIINPAFS AAAIAEADFN KSEPWELPQM  60
AKMGEKEWYF FNQRDRKYPT GMRTNRATQT GYWKATGKDR EILNGRTVLV GMKKTLVFYK  120
GRAPHGEKTN WVMHEFRLEP RLPDLPKEDW VVCRVFHKNT PAPARIPTTM SQIPNFFPMM  180
NPMPADFPIT VGFDIGEPKW KPPEPSEYYN PIDTTDHQLQ LPVGKLPFPT PSIPPMMIPP  240
INTYPLPTLD TGFFPFDQLA INEPMGMPVE ALPECKMEEE GSWSTMPNIS TSFEAASMED  300
LEFWEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18270.13e-76NAC family protein