PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023518277.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family SBP
Protein Properties Length: 140aa    MW: 15841 Da    PI: 6.5086
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023518277.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP124.35.1e-3955131177
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                     +Cq+++C++dl+ a+ yhrrhkvCe+hska+vv+++gleqrfCqq  rfh++sefDe+krsCrrrLa+hnerrrk+ 
  XP_023518277.1  55 RCQADSCNVDLNGARAYHRRHKVCEFHSKAAVVILAGLEQRFCQQXIRFHSVSEFDETKRSCRRRLAGHNERRRKNL 131
                     6**************************************************************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
MEHSGDQGWG DPVEEEEEED EDDDDEIGFV KDERKKRAVS GSRSGGGGGR TSVARCQADS  60
CNVDLNGARA YHRRHKVCEF HSKAAVVILA GLEQRFCQQX IRFHSVSEFD ETKRSCRRRL  120
AGHNERRRKN LPDFQGQSST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.11e-35SBP family protein