PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023518345.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 256aa MW: 29654.3 Da PI: 10.4733

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023518345.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	96.4	2.2e-30	62	112	2	52
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 prlrWtp+LH++Fv+ave+LGG+e+AtPk +l++m+v+gLt++hvkSHLQ XP_023518345.1 62 PRLRWTPDLHRCFVHAVERLGGEERATPKMVLQIMNVNGLTISHVKSHLQV 112 8************************************************73 PP
2	Myb_DNA-binding	44.7	3e-14	63	112	1	46
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqk 46 r+rWT++++ +v+av++lGg+ t+k + + m+ +g+t ++ks++q XP_023518345.1 63 RLRWTPDLHRCFVHAVERLGGEeraTPKMVLQIMNvNGLTISHVKSHLQV 112 89**********************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MRLAFNSGFL GLFPRPLQDL CINIIIIQLN MRVSRRRVLS SSFHDINFRP PMVRPYVRSK 60 MPRLRWTPDL HRCFVHAVER LGGEERATPK MVLQIMNVNG LTISHVKSHL QVCHGQMYRS 120 SKQEQETPQV KKLNNHEVPG HQLPDQLHGR RFIHQKLARK EKQEISNEQR KCKEKKPNSY 180 LIFKDITKRC TVQEQNCFGS SKSHEDLKRL DHSNAVERVG DETMSLCLSL RSFQPLILSK 240 AANSDVNDVS LELSLA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	169	176	QRKCKEKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	4e-31	G2-like family protein