PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023518416.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 261aa    MW: 29564.7 Da    PI: 10.9337
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023518416.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.71.4e-1081132354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h  +E++RR+ri   +++Lr +lP++sk++++K  Ka +L ++++ +k+L
  XP_023518416.1  81 QKHRLAEQNRRNRISGQYATLRAILPSLSKTDKRKHKKAFVLAETIRRVKEL 132
                     68*************************99******************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MYEKRSSLSI TAILFPSRKV QLKGEPCYPM VLLHQVMQSM QSYPTAGTME RIYPQWQPPT  60
IKNYSPISSL PRKEPKLYAA QKHRLAEQNR RNRISGQYAT LRAILPSLSK TDKRKHKKAF  120
VLAETIRRVK ELKKLVSEKT AANRGVKECG IPSGANRLSL ENCDGVEGMV KAVMSCEDRQ  180
DIMAELGKAL KTVKMKVVRA EMVTVGGRNK FVLWMQGPKE GPAAGGVKRA LDAVMRKPSW  240
IARKPRTDWH TRLPTPNRYG Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.12e-28bHLH family protein