PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023518423.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 232aa    MW: 26503.7 Da    PI: 7.8426
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023518423.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.000136991123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H+++H
  XP_023518423.1 69 YSCSFCKREFRSAQALGGHMNVH 91
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MEMEPKPCWM MWEDNKKNKN KNKNENRLTT ASDHLNNKAS SFDDSWEEQA FADDASGRLG  60
GCVWPPRFYS CSFCKREFRS AQALGGHMNV HRRDRAMLKH ESFKPQIETH LQIPPKNNPF  120
TSLIDLPQHP SSQFVCDENL AFNPNPKSSQ NSVDESDHKW RQSLDLSIKT TDLFKDDAVC  180
CKRKRSDHHS TSTVAFVLRS EVIGLSHSSI EDLDLELRLG DGGGSRTKPK LK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06070.12e-25C2H2 family protein