PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023518425.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family G2-like
Protein Properties Length: 313aa    MW: 34483.8 Da    PI: 6.5853
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023518425.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like105.92.3e-334296155
         G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    kprlrWt +LHerFv+av+qLGG++kAtPk+i+++m+vkgLtl h+kSHLQkYRl
  XP_023518425.1 42 KPRLRWTADLHERFVDAVTQLGGANKATPKAIMRTMNVKGLTLFHLKSHLQKYRL 96
                    79****************************************************8 PP
2Myb_DNA-binding66.16.6e-214495148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r+rWT++++e++vdav+qlGg    t+k+I+rtm+ kg+tl ++ks++qky+
   XP_023518425.1 44 RLRWTADLHERFVDAVTQLGGAnkaTPKAIMRTMNvKGLTLFHLKSHLQKYR 95
                     89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MFPRLVNPDG DIQIHGSRGS VASDLTHPHR GDPCLVLTSD PKPRLRWTAD LHERFVDAVT  60
QLGGANKATP KAIMRTMNVK GLTLFHLKSH LQKYRLGKQS GKDMGEASKD GAYLLESPSI  120
SNFSPDLPIS EMTDGYEVKE ALRAQMEVQS KLHLQVEAEK HLRIRQDAER RYLAMLERAC  180
KMLADQFIGG AVSDSDSKKS QGLDHKSPRS SSIDPLGFYA SQSQGMERAN GTEELQANPP  240
YQRADCSTES CLTSNESPGG LTMEKSPVAS KKNIVNLDSA NASLIWDEAR EGIQDANIIQ  300
INHHGVSECD MWG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.16e-63G2-like family protein