PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023518458.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 693aa MW: 75965.2 Da PI: 7.1085

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023518458.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.4	5.6e-09	498	535	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + XP_023518458.1 498 FEHflHPYPSDADKLLLARQTGLSRNQVSNWFINARVR 535 664559******************************88 PP
2	BELL	115.5	2.7e-37	358	429	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +r e+q++k+kLls+l+eV++rY+ y+eq+q+v++sF+ v+g g+a+pYt+l +ka+SrhFrcLkdai+eq+ XP_023518458.1 358 DRIEHQRRKVKLLSMLDEVERRYNLYREQMQMVVNSFDLVMGFGAAAPYTTLTQKAMSRHFRCLKDAITEQL 429 589*******************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
MGIAKGPLIL SNKPTNCANS SMSHDYHPHQ GILAFSNPLD KSNSPSLPHQ IRRDKLRVDS 60 FSSDPLPPPP PTVAGIDEHL HHHHHHHQQH LHHVYATSPT EGTMLSDMFN YPPTPSAAPA 120 SVEFSDNFRT LRQPNSASAM QLFLMNPPPP PPPRSPSPPS TSSTLHMLLP NLPSGSLQGF 180 ESGGVGDQTG FGQFAVAENQ GLSLSLHSSS LQHLEDVGAG AKADELRIRD GGMLYNYNNN 240 NNQVHGGGGN GSNSSILQYS FRNNSENSPH SFQMNPNHQV QIGFGSSLGV VNLLRNSKYV 300 KAAQELLEEF CSVGRVQLKK NKSNMKQSHN NPETAAGGSG GGASSSSSKD HPPLSATDRI 360 EHQRRKVKLL SMLDEVERRY NLYREQMQMV VNSFDLVMGF GAAAPYTTLT QKAMSRHFRC 420 LKDAITEQLK QSYEALGEKG GNGGSGITKG ETPRLKLLEQ SLRQQRAFHQ MGMMEQEAWR 480 PQRGLPERSV NILRAWLFEH FLHPYPSDAD KLLLARQTGL SRNQVSNWFI NARVRLWKPM 540 VEEMYQIEGK DETDHSHQQQ PSKDDDDDTT DNKIQNSAIN AQNPTPTTAT TSSIPPPSTT 600 IAEEGAAGFT ATHDQFSELH DVWRHGSGQH YGTMSEDARA ATDVSNGPTL IRFGTSGTTT 660 GDVSLTLGLR HAGNTSAATM DNPSFSLRDF GHS

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

MGIAKGPLIL SNKPTNCANS SMSHDYHPHQ GILAFSNPLD KSNSPSLPHQ IRRDKLRVDS  60
FSSDPLPPPP PTVAGIDEHL HHHHHHHQQH LHHVYATSPT EGTMLSDMFN YPPTPSAAPA  120
SVEFSDNFRT LRQPNSASAM QLFLMNPPPP PPPRSPSPPS TSSTLHMLLP NLPSGSLQGF  180
ESGGVGDQTG FGQFAVAENQ GLSLSLHSSS LQHLEDVGAG AKADELRIRD GGMLYNYNNN  240
NNQVHGGGGN GSNSSILQYS FRNNSENSPH SFQMNPNHQV QIGFGSSLGV VNLLRNSKYV  300
KAAQELLEEF CSVGRVQLKK NKSNMKQSHN NPETAAGGSG GGASSSSSKD HPPLSATDRI  360
EHQRRKVKLL SMLDEVERRY NLYREQMQMV VNSFDLVMGF GAAAPYTTLT QKAMSRHFRC  420
LKDAITEQLK QSYEALGEKG GNGGSGITKG ETPRLKLLEQ SLRQQRAFHQ MGMMEQEAWR  480
PQRGLPERSV NILRAWLFEH FLHPYPSDAD KLLLARQTGL SRNQVSNWFI NARVRLWKPM  540
VEEMYQIEGK DETDHSHQQQ PSKDDDDDTT DNKIQNSAIN AQNPTPTTAT TSSIPPPSTT  600
IAEEGAAGFT ATHDQFSELH DVWRHGSGQH YGTMSEDARA ATDVSNGPTL IRFGTSGTTT  660
GDVSLTLGLR HAGNTSAATM DNPSFSLRDF GHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-124	TALE family protein