PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023518589.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 257aa MW: 29146.6 Da PI: 10.1736

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023518589.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99	3.3e-31	61	114	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH rF++av++LGG+++AtPk +l+lm++kgL+++hvkSHLQ+YR+ XP_023518589.1 61 PRLRWTPDLHFRFLHAVQSLGGQQNATPKLVLQLMNIKGLSIAHVKSHLQMYRS 114 8****************************************************7 PP
2	Myb_DNA-binding	50.2	6.1e-16	62	113	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ ++++av+ lGg t+k++ + m+ kg++ ++ks++q+y+ XP_023518589.1 62 RLRWTPDLHFRFLHAVQSLGGQqnaTPKLVLQLMNiKGLSIAHVKSHLQMYR 113 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MEGGRDGGAA AAECSNKSRS DSNKSQSELG NEGSSSNSTI EENDERQKKP TVRPYVRSKL 60 PRLRWTPDLH FRFLHAVQSL GGQQNATPKL VLQLMNIKGL SIAHVKSHLQ MYRSKKSNEM 120 TTVADQRVLM SQTSDRNIFT VSQIPMFQRH NQTYPSNIFR FGSHSWSDYE NKTTQTLYTG 180 KASALSEARS REFGTSTVGE RNTRMRKGEE ELDLSLSLKI AAREEMKIEK RRRIEQEGLE 240 DRTDLSLSLC SFHSKSP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	230	234	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	3e-48	G2-like family protein