PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023518605.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 209aa MW: 22258 Da PI: 6.8666

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023518605.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	108.7	8.7e-34	52	135	5	88
TCP 5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg 88 +++ ++hTkv+gR+RRvR++a+ca r+F+L+ eLG+ +d++tieWLl+qa+p+i+++tgt++ +a +++ss+ ++s++s + XP_023518605.1 52 SSSSRDRHTKVNGRGRRVRMPALCASRIFQLTCELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPISTVSSVMASSAPSVA 135 56889********************************************************99999666666666666655544 PP

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence
MVSEILPHKF PSSSDPHSQP TASHSLAVAT DSSLPNTTQP VVHRKSSTAL SSSSSRDRHT 60 KVNGRGRRVR MPALCASRIF QLTCELGHRS DGETIEWLLR QAEPSIIAAT GTGTVPAAPI 120 STVSSVMASS APSVACRVQP VAVAAAGGQG MFGMPPPSCR LNLCQPAGMD YSNGGDDYRY 180 MPFTALLLQP ATADEAEERH EAEEIFREQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37000.1	2e-30	TCP family protein