PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023518612.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family HSF
Protein Properties Length: 189aa    MW: 22194.2 Da    PI: 9.1689
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023518612.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind106.42.2e-33121202102
                     HHHHHHHHHC.................TGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSE CS
    HSF_DNA-bind   2 Flkklyeile.................deelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiw 79 
                     Fl+k+y++le                 +ee ++++sw+++gn f+v+ + ef++ +LpkyFkh+nf+SF+RQLn+YgFkk+++++         w
  XP_023518612.1  12 FLSKTYDLLEeagsfhlkaadqeeeeeEEEENRIVSWNAEGNGFIVWSPAEFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSQKR---------W 97 
                     999*******6655555555555544444999*************************************************9998.........* PP

                     EEEESXXXXXXXXXXXXXXXXXX CS
    HSF_DNA-bind  80 eFkhksFkkgkkellekikrkks 102
                     eFkh++F++g+k++l +i rkk 
  XP_023518612.1  98 EFKHEKFQRGNKQMLGEIVRKKC 120
                     ********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MQSSKTRNPA PFLSKTYDLL EEAGSFHLKA ADQEEEEEEE EENRIVSWNA EGNGFIVWSP  60
AEFSEVLLPK YFKHNNFSSF IRQLNTYGFK KTSQKRWEFK HEKFQRGNKQ MLGEIVRKKC  120
EPSVFPAFLR SSHEGAETMA VGQKNGDHLQ LMEENKNLRR RKLELQARIA RFKALHIRLL  180
DCLDQCIKK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156162KNLRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.13e-38HSF family protein