PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023518712.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 210aa    MW: 23982.8 Da    PI: 6.2506
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023518712.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.3e-20134183255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+W+AeIrdp+    r +r++lg+f+tae+Aa+a+++a+ +++g
  XP_023518712.1 134 RFRGVRQRP-WGKWAAEIRDPR----RaTRVWLGTFDTAEKAARAYDRAAIEFRG 183
                     69*******.**********82....48***********************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MSGSSGDLDS APFHSTCKLA VEEEHSIMVS ALTHVVSDGR IGLTHTQYQL LAAFDDAQLP  60
AIELWFPSGD TCEVCRIVGC LGCNYFQDGN YNHNHNQNQI QIQNVVPVEE DEEKDQDEEK  120
KIVVGNKKRR MKRRFRGVRQ RPWGKWAAEI RDPRRATRVW LGTFDTAEKA ARAYDRAAIE  180
FRGDKAKLNF PASDYQTTEQ EQKPKLEIQE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1126133NKKRRMKR
2127132KKRRMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.17e-26ERF family protein