PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023518732.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family Dof
Protein Properties Length: 259aa    MW: 28573.7 Da    PI: 10.1456
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023518732.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.91.3e-393086561
          zf-Dof  5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                    alkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+ 
  XP_023518732.1 30 ALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRL 86
                    789***************************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MASPSPIMDK PRQQQQQLQR RQQQPPLPPA LKCPRCDSSN TKFCYYNNYS LSQPRHFCKA  60
CKRYWTRGGT LRNVPVGGGC RKNKRLKVSS SSSSSSVNGT STSTPSQNPS FLNSINATTA  120
NISSSASTHI NNPMFFGFDA IGGGLGFSSS GFLSHIGDLR EGFNSAKQIQ DISLNSNHFH  180
HPTISFDRNS QFSGNFEANL TMPMKEVKME GLNRLRQNHT EQVDLSNFSD PSHFWNSTTA  240
ATGNWHDPTN NGSSIASLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28310.21e-34Dof family protein