PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023518785.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 193aa MW: 21939.5 Da PI: 8.4754

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023518785.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.9	1.2e-29	99	156	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYG+K++k++++pr+YY+C+s+gC vkk+ver++ed ++v++tYeg H he XP_023518785.1 99 QDGFKWRKYGKKSIKNNPNPRNYYKCSSSGCGVKKRVERDREDSSYVITTYEGIHSHE 156 8********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MNSLQNPTQF EDSSSSFMDL LDFSGYLLPD FWLEPETTAF PEAIIGGRTR SMEEATSTMD 60 KNSIDEWRER RGVKRKQKGR GGGCHKVAFR TKSELEILQD GFKWRKYGKK SIKNNPNPRN 120 YYKCSSSGCG VKKRVERDRE DSSYVITTYE GIHSHESPFS KCCNDPIFHS HGSCPNSTYL 180 HLSSPPCSST TTL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	70	76	RRGVKRK
2	70	77	RRGVKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64810.1	1e-38	WRKY family protein