PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023518842.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 254aa MW: 29509.3 Da PI: 8.5949

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023518842.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	143	1.7e-44	5	139	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 l pGfrF Pt+eelv++yL+ k+e+ + e++++i+ +diy+++PwdLp+ +k ++++w+fF+ r++++a+g r++r t++gyWkatg XP_023518842.1 5 LIPGFRFYPTEEELVSFYLNTKLEDGRhdlkQEMDQIIPILDIYDFNPWDLPRyageVCKRDKEQWFFFIARQESEARGGRPKRLTTTGYWKATG 99 579*******************99966655555689999*******546654455777*************************** PP NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 + +v+s++++++glkkt+vfy+grap+g+kt+W m+ey+ XP_023518842.1 100 SPSHVYSSTHKTIGLKKTMVFYNGRAPHGTKTEWKMNEYK 139 *************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MENYLIPGFR FYPTEEELVS FYLNTKLEDG RHDLKQEMDQ IIPILDIYDF NPWDLPRYAG 60 EVCKRDKEQW FFFIARQESE ARGGRPKRLT TTGYWKATGS PSHVYSSTHK TIGLKKTMVF 120 YNGRAPHGTK TEWKMNEYKA IHPSSSSSAT PVFRLRQEFS LCRIYRKSKT LRSFDRRPQP 180 RELEIAQSTA KAQAATTELP SSANEPNPTL KAPLTGTMLG ESSRTIAETS NELNVEAMRD 240 AYEPMWDWEL LNWF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	1e-74	NAC family protein