PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023519022.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 345aa    MW: 39514.1 Da    PI: 4.6791
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023519022.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.41.1e-15116161352
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkk 52 
                     ykGVr++k +g+++AeIrdp        +r +lg++ taeeAa a+   + +
  XP_023519022.1 116 YKGVRRRK-WGKYAAEIRDP-----IhrRRLWLGTYNTAEEAAIAYQTKKHE 161
                     9****998.**********8.....337*****************9776665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MGGFRRQFVS RDIYGNDDKK MKQPKQEKSN SVRKIRVLLH DPDATDYSSE EDEHFNQNAK  60
NIVWEIPFPG ISRKPSKEAS HKQNADADAD ADAAKFKTKT DVKESSGKTQ RSSSMYKGVR  120
RRKWGKYAAE IRDPIHRRRL WLGTYNTAEE AAIAYQTKKH EFESMQTMEK NNSELGGEKK  180
IRSLVVDTAE SKETMSMFSH PSPSSVLDLS TGSSCSNGLK SVKQFNVDQT MEEHSITNEC  240
MVMLDGVEDM LESIYKDEPS ISDILDEMPM PILPFDSREL DFQVFDDNAL ICSDFDRLYN  300
DMNYVEDCTL YNIENSLGAL DLPPMEIEFD KEFSWFDETL SISCI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117123KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.13e-23ERF family protein