PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023519465.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 328aa MW: 36825.9 Da PI: 8.0498

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023519465.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	177.1	4.9e-55	17	143	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL+kkv + ++++ + i evd++k+ePwdLp k+k +e ewyfF+ rd+ky+tg r+nrat+sgyWkatgkdke+++ XP_023519465.1 17 LPPGFRFHPTDEELISQYLCKKVMDANFSC-KPIGEVDLNKSEPWDLPWKAKMGEGEWYFFCLRDRKYPTGLRTNRATESGYWKATGKDKEIYR- 109 79**************************.88***********88889999**********************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++lvg+kktLvfy grapkgek++Wvmhe+rle XP_023519465.1 110 GKTLVGMKKTLVFYGGRAPKGEKSNWVMHEFRLE 143 999**************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence
MEENMTASVH DESQIVLPPG FRFHPTDEEL ISQYLCKKVM DANFSCKPIG EVDLNKSEPW 60 DLPWKAKMGE GEWYFFCLRD RKYPTGLRTN RATESGYWKA TGKDKEIYRG KTLVGMKKTL 120 VFYGGRAPKG EKSNWVMHEF RLEGKPSAIN LPSTAKNEWV ISRVFQKSCG GKKVHLSGLV 180 KLGSSSSALP PLKDSSSSSI KINELAHVPC FSNTMDSSQR TLPKITDCSF NFSCFLPTIF 240 PRNTQPTSLY NPQAISLPLN LQFPNMAETF KPEGERISVS QETGLTTDMN NEISSVVSDL 300 EMGRLAFENQ DNPSASTVPM NPHIAWNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-123	NAC family protein