PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023519614.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 231aa    MW: 25931.4 Da    PI: 6.0543
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023519614.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.53.7e-1180125654
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        E+ RRd++N++f eL ++l +    + +K +K++iL  Av+ I +L
  XP_023519614.1  80 AHKEKMRRDKLNDRFLELNSILNHG---RPPKIDKSAILGDAVRMIIHL 125
                     678*********************8...89****************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MASSEFTDWV FDYGAIEDIP VPGGDLPSLD LPAFTLPSRD FTASFRADFD EQLEMPDDIK  60
ESGSRKRMSS SGSNAFGSKA HKEKMRRDKL NDRFLELNSI LNHGRPPKID KSAILGDAVR  120
MIIHLRDEAQ KLKESNETFL EKINEMKAEK SELRDEKQRL KEAKDNLEQK MKAFNTQPSF  180
LPHPPAFSSP NQVVGGKLVP VIGYPGVSMW QFMSPGAIDT SQDHVLRPPV A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.12e-69bHLH family protein