PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023519980.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 224aa MW: 25082.8 Da PI: 10.1841

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023519980.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	87.8	2.5e-27	53	158	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt....ssssasec...eaesssssasnsssg.. 88 g+kdrhsk++T +g+RdRR+Rlsa++a++++dLq++LG+ ++sk i+WL+ i++l+ + +++++ ++ + a ++ ++ XP_023519980.1 53 GGKDRHSKVCTMKGLRDRRIRLSAPTAIQLYDLQNRLGLSQPSKVIDWLIDVTRFDIDKLPPLhfpkDFDPNASFlhhL---DIADATAKAKHee 144 78*************************************************************5655333332222221...1111111111112 PP TCP 89 .............k 89 + XP_023519980.1 145 tgmlllqklspspN 158 23444444433332 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MTGRVNNMIS KLKQEGVHVE AKQMEGKRKK GPSRQGPFLR GNPRIFRVSP LFGGKDRHSK 60 VCTMKGLRDR RIRLSAPTAI QLYDLQNRLG LSQPSKVIDW LIDVTRFDID KLPPLHFPKD 120 FDPNASFLHH LDIADATAKA KHEETGMLLL QKLSPSPNHA SFSALQLQTN AMTENCCHFD 180 PPSFPFPLMD QANPASFSSP SEQLLFRPMT VPPEVSSYLP NGGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	5e-41	TCP family protein