PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023520006.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 253aa    MW: 27998.3 Da    PI: 6.2884
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023520006.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.5e-08144191455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+++Er RR +iN+++  L++++P +     k +  a +L + ++Y++sLq
  XP_023520006.1 144 SHSIAERIRRGKINERLRCLQDIVPGC----YKTMGMAVMLDEIINYVQSLQ 191
                     8*************************9....35599999**********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MAEFTANFQS LKPSPFPLMD MDPNQIPSLN FLDNIPVLFN DSFFGNQVAV PPRFPEIWGE  60
NFCQANQITA PVFEPTNPSG NDLHGSKKRR LQNEASESSS GNSTPQTKNN SGKGKRSKKG  120
DENDGEKPRE VVHVRAKRGQ ATDSHSIAER IRRGKINERL RCLQDIVPGC YKTMGMAVML  180
DEIINYVQSL QNQVEFLSMK LTAASSYYDF NSDSDTADRL KGKEMREGNG GVLVASTEDG  240
PFAMSFGSYS TAI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
187115KKRRLQNEASESSSGNSTPQTKNNSGKGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73830.27e-58bHLH family protein