PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023520026.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family G2-like
Protein Properties Length: 332aa    MW: 36419.7 Da    PI: 6.3613
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023520026.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like94.77.3e-30153206155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +prl+Wtp+LH+rFv++v++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  XP_023520026.1 153 RPRLVWTPQLHKRFVDVVARL-GIKNAVPKTIMQLMNVEGLTRENVASHLQKYRL 206
                     59*******************.********************************8 PP
2Myb_DNA-binding49.21.2e-15155205148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vd+v++lG +   +ktI++ m+ +g+t++++ s++qky+
   XP_023520026.1 155 RLVWTPQLHKRFVDVVARLGIKnaVPKTIMQLMNvEGLTRENVASHLQKYR 205
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MGPEVKVGDD SGGGDDENGA HEGRVLEWEV GLPEADDLTP LSQMLIPPEL ASAFSISTGP  60
CRTLMDVNRA SQDTLSNLRG FQSHAFSSNN FKSFNDDQTR DHDTMVVEGD ETTERDAGSD  120
SRKLRKVDCV EEADSALRMD NSMDDPSARA SKRPRLVWTP QLHKRFVDVV ARLGIKNAVP  180
KTIMQLMNVE GLTRENVASH LQKYRLYLKR MQGSSHEGPS SPDRIFASTP VPQTLHESAS  240
SGHASGNGHL PVPTPMPYGP PMMPMPMLGM AVSGHAHSYM GMPVAHPGSA QGYHSFETHP  300
YNMMHQRDWS GNKYGSIVPY PHPHVPPSSN DK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46640.23e-73G2-like family protein