PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023520216.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB

Protein Properties

Length: 233aa MW: 26708.9 Da PI: 9.9206

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023520216.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.3	6.6e-17	4	49	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed++l ++v+++G+++W++Ia+++ gR++k+c++rw++ XP_023520216.1 4 RGHWRPAEDDKLRELVERYGPHNWNAIAQKLL-GRSGKSCRLRWFNQ 49 899**************************9.*********996 PP
2	Myb_DNA-binding	52.5	1.1e-16	56	99	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+eE+e+l ++ +G++ W+ Iar ++ gRt++ +k++w+ XP_023520216.1 56 RSPFTEEEEERLMASHRVHGNR-WAIIARLFP-GRTDNAVKNHWHV 99 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MCSRGHWRPA EDDKLRELVE RYGPHNWNAI AQKLLGRSGK SCRLRWFNQL DPRINRSPFT 60 EEEEERLMAS HRVHGNRWAI IARLFPGRTD NAVKNHWHVI MARKSRDSSK AKAKAKAKTK 120 TLTPSSQNHL LFSSFLQTSC PPNNNASLFL NHSLYPNPIS SFIPKPTDRS VEFYDFLHLN 180 AESINASEVI DNSRKEDYEE VNQEATATAA RPLFPFIDFF SAQTSNSISS SHN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	3e-75	MYB family protein