PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023520270.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB_related

Protein Properties

Length: 465aa MW: 51405.6 Da PI: 6.6231

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023520270.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.9	3.6e-16	58	102	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rW +eE+e++++a k++G + W+ I ++g ++t+ q++s+ qk+ XP_023520270.1 58 RERWKEEEHEKFIEALKLYGRD-WRQIEDHVG-TKTAVQIRSHAQKF 102 78****************77.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MGAANMQSQN AGGGLCSDNT SSSLYESTAT ADQLKDPFSS GKEYCPKARK PYTITKQRER 60 WKEEEHEKFI EALKLYGRDW RQIEDHVGTK TAVQIRSHAQ KFFSKVMRNS NGCTATLGGC 120 IEIPPPRPKR KPAHPYPRKE VPGSHKLSSI SEQTRSLSPQ LSEKECQSPT STVVAAGGSD 180 ALNCANSRIH HDSASPDSSI PSSEPNSSSL DNESPTVSPG TDNSTPQDKI SKNLELFPKD 240 VNEKDVSTKE VSIQSLKLFG RTVLITNPHK QTPTVETCAF EADHKQGENH KQISPWNSSK 300 VMGNTEGTWN HGAFYFIQLN SSDSNQDPSS TVPLSWWSSY GSYPLSFVQC FKQADSELNP 360 EVDDKETHKD QSCCGSNTGS VNSEENGDKD GENDIQSYKL FPNRDGDSVS KDELIGKALS 420 SELISSHEKN TKGFVPYKRC MTERATKSHS ITDAEREEKR IRLCL

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MGAANMQSQN AGGGLCSDNT SSSLYESTAT ADQLKDPFSS GKEYCPKARK PYTITKQRER  60
WKEEEHEKFI EALKLYGRDW RQIEDHVGTK TAVQIRSHAQ KFFSKVMRNS NGCTATLGGC  120
IEIPPPRPKR KPAHPYPRKE VPGSHKLSSI SEQTRSLSPQ LSEKECQSPT STVVAAGGSD  180
ALNCANSRIH HDSASPDSSI PSSEPNSSSL DNESPTVSPG TDNSTPQDKI SKNLELFPKD  240
VNEKDVSTKE VSIQSLKLFG RTVLITNPHK QTPTVETCAF EADHKQGENH KQISPWNSSK  300
VMGNTEGTWN HGAFYFIQLN SSDSNQDPSS TVPLSWWSSY GSYPLSFVQC FKQADSELNP  360
EVDDKETHKD QSCCGSNTGS VNSEENGDKD GENDIQSYKL FPNRDGDSVS KDELIGKALS  420
SELISSHEKN TKGFVPYKRC MTERATKSHS ITDAEREEKR IRLCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	2e-42	MYB_related family protein