PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023520375.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 289aa    MW: 31685.5 Da    PI: 6.2568
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023520375.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.71.7e-1593137347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++++ ++ G+g+W+ I+r + k+Rt+ q+ s+ qky
   XP_023520375.1  93 PWTEEEHKLFLQGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 137
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MPTTEAGDVE MDAAGVTKEI MLFGVRVVVD PMRKSVSMNN LSQYEHPPSE ASNEDNGRNT  60
KSNVSAAAGY ASADDAVPNS GGIRERERKR GVPWTEEEHK LFLQGLQKVG KGDWRGISRN  120
FVKTRTPTQV ASHAQKYFLR RSNLNRRRRR SSLFDITTDS VKVAAEEEQI QLQDNSSQFQ  180
YLLPPPPPPP ETGNVNGYHP VMPTFPLPVC PAILPVPIPM DNLPLRHDNL ENDTSSTAEV  240
MPLNPTTPEL NLNSGALSLN LDSTTSLTKH PAFQGISSMS SGDNIISVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74840.29e-55MYB_related family protein