PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023520613.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 222aa MW: 24855.3 Da PI: 8.6226

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023520613.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.8	4.7e-14	55	101	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+E+rRR+riNs +++Lr+llP + K +Ka+ L k+ve +k+L XP_023520613.1 55 KNHKEAEKRRRERINSHLDKLRTLLPCN-----SKTDKASLLAKVVERVKEL 101 58***********************8.....7***********99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 222 aa Download sequence
MMQADESCEL YRFLAQNKGL RLRGASGSCS FPAGQSLSTE TALPSPHDRA LAALKNHKEA 60 EKRRRERINS HLDKLRTLLP CNSKTDKASL LAKVVERVKE LKHQTADIAE LETFPSESDE 120 ISVLSGEESD DGRLLFKASL CCEDRSDLIP ELNDILNSLQ LKTVRADIVT VGGRIRNVLL 180 IAANHHHSLE SLHFLQNALK SLLERSNCSD RSKRRRLVIA HK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	213	217	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41130.1	9e-69	bHLH family protein