PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023520689.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 367aa MW: 41853 Da PI: 8.9279

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023520689.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.7	1.1e-49	22	147	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 + pGfrF+Ptdeel+++yLk+k++g + ++ e+i+ev+iyk+ePwdLp k++ ++++ew+fFs+r kky++g++++rat+ gyWkatgk+++v+s XP_023520689.1 22 MFPGFRFSPTDEELISFYLKNKLDGYEKSV-EIIAEVEIYKYEPWDLPaKSIIQSDNEWFFFSPRGKKYPNGNQTRRATDLGYWKATGKERNVKS 115 579**********************999.99***********767778899********************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyr 127 +++++g+k+tLvf++grapkge+t+W+mhey+ XP_023520689.1 116 -GSNVIGTKRTLVFHTGRAPKGERTEWIMHEYN 147 .99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MAAAAENGVS KELQLSMTVS SMFPGFRFSP TDEELISFYL KNKLDGYEKS VEIIAEVEIY 60 KYEPWDLPAK SIIQSDNEWF FFSPRGKKYP NGNQTRRATD LGYWKATGKE RNVKSGSNVI 120 GTKRTLVFHT GRAPKGERTE WIMHEYNNKD KAQDFLVVCR LRRNNEFRQH SSSNRASCSQ 180 MNLSSLQAHS GERVDSTSES NQKDAAEXLH LWNSSDGQKD YGSDDFYSDI LKDDIINLDT 240 APYDAASDLM PLDFHRSDTA RESQTEANDG LEWLPSQGFA NRRIRLKRRE ATKAMKLDAV 300 KIGGSRYKVE KVRFSSLELW RSRLMNTASS ISIVGCYVRV VVISFLLILL ALFMSRLEVF 360 GMPKGLY

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MAAAAENGVS KELQLSMTVS SMFPGFRFSP TDEELISFYL KNKLDGYEKS VEIIAEVEIY  60
KYEPWDLPAK SIIQSDNEWF FFSPRGKKYP NGNQTRRATD LGYWKATGKE RNVKSGSNVI  120
GTKRTLVFHT GRAPKGERTE WIMHEYNNKD KAQDFLVVCR LRRNNEFRQH SSSNRASCSQ  180
MNLSSLQAHS GERVDSTSES NQKDAAEXLH LWNSSDGQKD YGSDDFYSDI LKDDIINLDT  240
APYDAASDLM PLDFHRSDTA RESQTEANDG LEWLPSQGFA NRRIRLKRRE ATKAMKLDAV  300
KIGGSRYKVE KVRFSSLELW RSRLMNTASS ISIVGCYVRV VVISFLLILL ALFMSRLEVF  360
GMPKGLY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	282	290	RRIRLKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22290.1	4e-89	NAC family protein