PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023520762.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 192aa    MW: 21413 Da    PI: 10.5515
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023520762.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.5e-202372255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +gr++AeIrdp +   ++r++lg+f++ae+Aa+a+++a+ +l+g
  XP_023520762.1 23 RYRGVRRRP-WGRFAAEIRDPLK---KTRVWLGTFDSAEDAARAYDNAAISLRG 72
                    7********.**********743...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MRRGRAAADT AVRVVPITGS ERRYRGVRRR PWGRFAAEIR DPLKKTRVWL GTFDSAEDAA  60
RAYDNAAISL RGPKAKINFP LPTPTSFFDY PPPCPDRRFL TNPHRPTSST LSSTVESFSG  120
PRPPSAAAAT SASRRYPRTP PVVPEDCHSD CDSSSSVIDD GDIASSSMIR RKSPLPFDLN  180
IQPSDHLDFW WR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20310.17e-13ERF family protein