PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023520914.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB

Protein Properties

Length: 208aa MW: 24191.3 Da PI: 6.1405

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023520914.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55	1.9e-17	5	50	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT+eEd ll+++++q+G g W+++++ g++R++k+c++rw++yl XP_023520914.1 5 AWTEEEDYLLKKCIEQYGEGKWHRVPQLAGLNRCRKSCRLRWLNYL 50 6*******************************************97 PP
2	Myb_DNA-binding	51.8	1.9e-16	56	100	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eE el++++++ lG++ W+ Ia +++ gRt++++k++w+ + XP_023520914.1 56 RGSFTPEEVELILNLHNILGNR-WSIIAGKLP-GRTANDIKNYWNCH 100 89******************.*****.*********977 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MGGIAWTEEE DYLLKKCIEQ YGEGKWHRVP QLAGLNRCRK SCRLRWLNYL RPNIKRGSFT 60 PEEVELILNL HNILGNRWSI IAGKLPGRTA NDIKNYWNCH LSKKVNGHQG GDQKPNSTKW 120 KPIQEESSKS KEKEYVEDQN GEKQGILIQN QNQNVPIVEQ SGSIRMENIQ MDYQFDQEVV 180 AMADGDGCNK RELWDDWVSE MDLWIDSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	1e-53	MYB family protein