PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023521023.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 191aa    MW: 21370.8 Da    PI: 8.2875
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023521023.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.4e-183081156
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    ++++GVr +  +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++g+
  XP_023521023.1 30 PKFRGVRLRA-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAALAIKGH 81
                    79*****998.**********843...6***********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MTTTSHHSAA VSSAVTCRKR RRTLTEESTP KFRGVRLRAW GKWVSEIREP RKKSRIWLGT  60
YPTAEMAARA HDVAALAIKG HRAFLNFPQI KHQLPRPASL SAKDIQAAAA QAAALKHQPN  120
PTESSPSETT SCEEEETWFD LPDLVVRGIN DGFLLDFDYS SSSSSSSSWH FSGDHDDLQW  180
HSDYPHTIFP A
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11822RKRRR
21823RKRRRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.16e-41ERF family protein