PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023521101.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB

Protein Properties

Length: 331aa MW: 37796.1 Da PI: 9.1062

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023521101.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	7.1e-17	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++q+G+g +W + ++++g++R++k+c++rw++yl XP_023521101.1 14 KGPWSAEEDTKLKSYIEQHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37.9	4.1e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd+++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_023521101.1 69 GGFSEEEDKIICSLYLSIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MGRAPCCDKA NVKKGPWSAE EDTKLKSYIE QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDKIIC SLYLSIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLFGK 120 QRKEHQQQQQ QQATRRGNAL RHHGTMNRSN SWHQATITTC XQATRRGNAL RHHGTMNKSN 180 SAIPYWPQQQ QLPVAPSYYN NMPSSDHINP IENLSKFGAQ FMEQSVYNNN NVNGYGNGYY 240 FPLLQGQSSS QMVDLENYDM GFDDPRRVLC GFEFVYGDHH NQLMGTSNSH GYEMGPLISS 300 CPSNYEAMLQ DLSTMTQEYD THLKIMDSNA V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	4e-83	MYB family protein