PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023521141.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GeBP
Protein Properties Length: 217aa    MW: 25942.2 Da    PI: 8.7086
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023521141.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573591.3e-1855141797
          DUF573   7 wseeDeivlLqGlidfkaktgkspsddidafyefvkksis.fkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                     w eeDei++Lq l +f    g s  +  +afyefvkk+++  +vs +q+++Ki r+Kk + k++ + k+ ++ +fs+ h+ ++f ls++iWg
  XP_023521141.1  55 WEEEDEIIVLQQLYQF----GGSNASYSKAFYEFVKKRLNnNQVSMNQMSNKIDRFKKEYLKNECR-KKVNDLKFSEYHEFEVFMLSRRIWG 141
                     ****************....667778899*********97268********************999.9***********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MASKRHSRTL NSYSSEDNSD SEYKIEEESS EESEEQSKRN NNSSKKRIKR RVLEWEEEDE  60
IIVLQQLYQF GGSNASYSKA FYEFVKKRLN NNQVSMNQMS NKIDRFKKEY LKNECRKKVN  120
DLKFSEYHEF EVFMLSRRIW GGKRSKSNGG RMKYAKGFSE YLEEMDIDID CLTPSCLEHF  180
KKEWEVQLLM YIELLSKKSK FDAKLMELLF TKSSHNN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.17e-09GeBP family protein